Parameter Setting
99 metabolite sets based on normal human metabolic pathways
81 metabolite sets based on KEGG human metabolic pathways (Nov. 2025)
461 metabolite sets based on drug pathways from SMPDB.
3425 metabolite sets based on RaMP-DB pathways.
817 entries integrating PathBank, Reactome, WikiPathways, and KEGG (Nov. 2025). (details)
123 entries based on KEGG metabolic pathways of common human gut bacteria (details)
139 KEGG pathways integrating human (host) and gut bacterial metabolism.
480 metabolite sets reported in human blood.
385 metabolite sets reported in human urine.
174 metabolite sets reported in human cerebral spinal fluid (CSF).
67 metabolite sets reported in human feces.
39 super chemical class metabolite sets or lipid sets
617 main chemical class metabolite sets or lipid sets
1250 sub chemical class metabolite sets or lipid sets
4,598 metabolite sets based on their associations with SNPs loci.
62 metabolite sets based on dietary and chemical exposures.
912 metabolic sets predicted to change in the case of dysfunctional enzymes.
78 metabolite and lipid sets based on organ, tissue, and subcellular localizations.
50 dietary or host substrates, each with its microbial transformation products (134 compounds).
119 food groups with the compounds they contain (3,494 compounds).
Microbial transformations and Food group composition keep only the compounds found in the MetaboAnalyst compound database.
define your own customized metabolite sets