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2) Try our example data

IBD
Three columns (m.z, p.value, t.score)
Example peak list data created from a subset of pediatric IBD stool samples (12 IBD patients and 12 healthy controls) obtained from the Integrative Human Microbiome Project Consortium (iHMP). This data was collected using a Q-Exactive Plus Orbitrap MS (negative ion mode).
ImmuneCell
One column (m.z ranked by p.value)
Example ordered peak list data obtained from untargeted metabolomics of human monocyte-derived dendritic cells under stimulation by a strain of yellow fever virus (YF17D, vaccine strain), collected using an Orbitrap LC-MS (positive ion mode).
Macrophages
Four columns (m.z, p.value, t.score, mode)
Example peak list from mice alveolar macrophages in lungs, with or without mTOR knock-out (details). This data was obtained using an Orbitrap LC-MS (C18 negative ion mode and HILIC positive ion mode)
IBD 2
Four columns (m.z, p.value, t.score, rt)
Example peak list data created from a subset of pediatric IBD stool samples (12 IBD patients and 12 healthy controls) obtained from the Integrative Human Microbiome Project Consortium (iHMP). This data was collected using a Q-Exactive Plus Orbitrap MS (negative ion mode).
ImmuneCell Table
Peak intensity table
Example peak intensity table from KO experiment of dendritic cells and epithelial cells treated in DSS.
R Command History
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Graphics Center
GroupSet ColorSet Shape*
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Note:

  • This setting only affects those graphics with group-specific color scheme
  • The shape option currently only affects scores plots in PCA and PLS-DA.
  • Use shape code 0 will set it to default shapes.

*Shape Code:

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