MetaboAnalyst 5.0 now contains a total of 12 modules organized into four general categories:

  • Exploratory statistical analysis: general statistics, biomarker analysis, two-factor/time-series analysis, and power analysis
  • Functional enrichment analysis: metabolite set enrichment analysis, metabolic pathway analysis, and pathway activity prediction from MS peaks (mummichog)
  • Data integration & systems biology: biomarker meta-analysis, joint-pathway analysis, and network explorer
  • Data processing & utility functions: LC-MS spectra pre-processing, batch effect correction, compound ID conversion, power analysis, and links to several spectra analysis tools
It accepts a variety of metabolomics data types, as well as list of genes or KEGG orthologs (KOs) to support integrative analysis with transcriptomics or metagenomics respectively.

Flow Chart
Genome Canada Genome Quebec NIH NSERC CRC
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